miRTar2GO

miRTar2GO is a method that predicts miRNA targets by allocating CLIPed regions of the mRNA 3' UTRs to miRNA seed regions.

Homepage: Link

Publication Date: April 7, 2017

Reference: [Journal] [Pubmed] [CrossRef]

Citations: 4 [via Pubmed]

Organism Specific:

human

Reference Genome Needed:

Online/Local: /

Installation/User Level: easy

User Adjustability:

User support:

Precomputed Target Results Available For Download:

Input Data Required:

miRNA

Target mRNA ReF Seq or gene name

miRNA sequence

Cross-Refferences:

MiRBase

RNAcoFold Web Server

Tarbase

miRDB

miRGator

miRGen

miRNAMap

Vir-Mir

ViTa

Reactome

KEGG

BioCarta

Nci-Nature

hiPathDB

Algorithm Features:

seed match

site accessibility

mRNA differential expression

Target Region: 3'UTR

Target Annotation:

NGS Data Needed:

Metaserver: