All the tools you need to analyse your miRNAs


miRNA Databases

miRGate is a curated database of human, mouse and rat miRNAs/mRNAs targets. It is designed to analyze miRNA and gene isoforms lists under a common and consistent space of annotations. Including all existing 3 UTR and the entirely known miRNAs. All Havana biotypes and ENCODE principal isoforms for the three organisms are also included.

Homepage: Link

Last Software Update: March 20, 2015
Publication Date: April 8, 2015
Citations: 44 [via Pubmed]

Organism Specific:
  • human
  • mouse
  • rat

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
  • GenXPro
  • Ensembl
  • PubMed

  • miRNA Databases
    Software Used For Target Prediction:
  • miRanda
  • PITA
  • TargetScan
  • micrTar
  • RNAhybrid

  • Data Collection:
  • target experimental
  • predicted target

  • Comments & Ratings